Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AP005117.1-201ENST00000584346 1413 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AL161772.1-201ENST00000610494 4412 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 HNRNPDP1-201ENST00000439535 754 ntBASIC11.3□□□□□ -0.6
SCXQ7RTU7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 KRT18P58-201ENST00000527480 1120 ntBASIC11.3□□□□□ -0.6
SCXQ7RTU7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SART3-203ENST00000546611 1184 ntBASIC11.3□□□□□ -0.6
SCXQ7RTU7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.3□□□□□ -0.6
SCXQ7RTU7 AC132938.6-201ENST00000623828 1655 ntBASIC11.3□□□□□ -0.6
SCXQ7RTU7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SCXQ7RTU7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.29□□□□□ -0.6
SCXQ7RTU7 AL356309.3-201ENST00000624132 1934 ntBASIC11.29□□□□□ -0.6
SCXQ7RTU7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCXQ7RTU7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms