Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 AL645608.8-201ENST00000606034 2086 ntBASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 AL121761.2-201ENST00000598007 1648 ntBASIC18.83■□□□□ 0.61
SWSAP1Q6NVH7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 AC108860.2-201ENST00000562760 2183 ntBASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWSAP1Q6NVH7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 MIR4492-201ENST00000581627 80 ntBASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 AL009183.1-201ENST00000603760 355 ntBASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SWSAP1Q6NVH7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AC004461.1-201ENST00000412461 403 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AL355306.1-201ENST00000415580 579 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 ADH5P3-201ENST00000433842 1137 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AP001350.2-201ENST00000625104 1094 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 AL513210.1-201ENST00000629608 234 ntBASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms