Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL805961.1-202ENST00000641562 540 ntBASIC20.27■□□□□ 0.84
RNF20Q5VTR2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.27■□□□□ 0.83
RNF20Q5VTR2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 AL645728.1-201ENST00000366221 2101 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ELK2BP-201ENST00000415014 1224 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 EMBP1-201ENST00000458200 901 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 RNPS1P1-201ENST00000507437 918 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 AL121912.1-201ENST00000603683 238 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 PI4KAP1-204ENST00000612579 1703 ntBASIC20.26■□□□□ 0.83
RNF20Q5VTR2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF20Q5VTR2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 AC006504.4-201ENST00000592118 1568 ntBASIC20.25■□□□□ 0.83
RNF20Q5VTR2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 LINC00895-201ENST00000629028 1637 ntBASIC20.25■□□□□ 0.83
RNF20Q5VTR2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 RPS2P1-201ENST00000434010 821 ntBASIC20.25■□□□□ 0.83
RNF20Q5VTR2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF20Q5VTR2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 AL391256.1-201ENST00000443260 1855 ntBASIC20.24■□□□□ 0.83
RNF20Q5VTR2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms