Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RBM48Q5RL73 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBM48Q5RL73 AP005117.1-202ENST00000581724 1908 ntBASIC15.53■□□□□ 0.08
RBM48Q5RL73 TNRC18P2-201ENST00000417666 2714 ntBASIC15.52■□□□□ 0.08
RBM48Q5RL73 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 AC013268.4-201ENST00000637413 2228 ntBASIC15.52■□□□□ 0.08
RBM48Q5RL73 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.52■□□□□ 0.08
RBM48Q5RL73 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.52■□□□□ 0.08
RBM48Q5RL73 AC019129.2-201ENST00000609837 1235 ntBASIC15.52■□□□□ 0.08
RBM48Q5RL73 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RBM48Q5RL73 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RBM48Q5RL73 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RBM48Q5RL73 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RBM48Q5RL73 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
RBM48Q5RL73 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RBM48Q5RL73 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.52■□□□□ 0.07
RBM48Q5RL73 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.52■□□□□ 0.07
RBM48Q5RL73 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RBM48Q5RL73 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RBM48Q5RL73 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 AC109462.3-201ENST00000573934 613 ntBASIC15.51■□□□□ 0.07
RBM48Q5RL73 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 AC092666.2-201ENST00000613287 246 ntBASIC15.51■□□□□ 0.07
RBM48Q5RL73 AL157888.1-201ENST00000631930 593 ntBASIC15.51■□□□□ 0.07
RBM48Q5RL73 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.51■□□□□ 0.07
RBM48Q5RL73 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.51■□□□□ 0.07
RBM48Q5RL73 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RBM48Q5RL73 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RBM48Q5RL73 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.5■□□□□ 0.07
RBM48Q5RL73 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RBM48Q5RL73 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RBM48Q5RL73 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RBM48Q5RL73 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms