Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFX7Q2KHR2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFX7Q2KHR2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RFX7Q2KHR2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RFX7Q2KHR2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 AC004461.1-201ENST00000412461 403 ntBASIC20.39■□□□□ 0.85
RFX7Q2KHR2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 AC105339.1-204ENST00000636249 355 ntBASIC20.39■□□□□ 0.85
RFX7Q2KHR2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFX7Q2KHR2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 TSEN15P1-201ENST00000423257 515 ntBASIC20.38■□□□□ 0.85
RFX7Q2KHR2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 AL513480.1-201ENST00000451731 511 ntBASIC20.38■□□□□ 0.85
RFX7Q2KHR2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 AL391256.1-201ENST00000443260 1855 ntBASIC20.38■□□□□ 0.85
RFX7Q2KHR2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.38■□□□□ 0.85
RFX7Q2KHR2 SNX33P1-201ENST00000592116 1762 ntBASIC20.38■□□□□ 0.85
RFX7Q2KHR2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AL355306.1-201ENST00000415580 579 ntBASIC20.37■□□□□ 0.85
RFX7Q2KHR2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 AC131009.4-201ENST00000624048 1740 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms