Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDE4BQ07343 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDE4BQ07343 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE4BQ07343 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.03■□□□□ 0.8
PDE4BQ07343 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE4BQ07343 MIR4515-201ENST00000584082 81 ntBASIC20.03■□□□□ 0.8
PDE4BQ07343 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE4BQ07343 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.03■□□□□ 0.8
PDE4BQ07343 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.03■□□□□ 0.8
PDE4BQ07343 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE4BQ07343 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE4BQ07343 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDE4BQ07343 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDE4BQ07343 KRT8P49-201ENST00000604166 1432 ntBASIC20.02■□□□□ 0.8
PDE4BQ07343 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE4BQ07343 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDE4BQ07343 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDE4BQ07343 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDE4BQ07343 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE4BQ07343 AL031432.2-201ENST00000566714 459 ntBASIC20.02■□□□□ 0.8
PDE4BQ07343 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 AL928711.1-201ENST00000570165 459 ntBASIC20.02■□□□□ 0.8
PDE4BQ07343 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 C20orf181-201ENST00000623918 480 ntBASIC20.02■□□□□ 0.8
PDE4BQ07343 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE4BQ07343 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 PRORSD1P-202ENST00000563365 2154 ntBASIC20.02■□□□□ 0.8
PDE4BQ07343 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE4BQ07343 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE4BQ07343 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PDE4BQ07343 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.02■□□□□ 0.79
PDE4BQ07343 AC022211.2-201ENST00000585075 2527 ntBASIC20.02■□□□□ 0.79
PDE4BQ07343 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE4BQ07343 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PDE4BQ07343 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.02■□□□□ 0.79
PDE4BQ07343 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDE4BQ07343 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE4BQ07343 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.01■□□□□ 0.79
PDE4BQ07343 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE4BQ07343 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 AC005829.1-201ENST00000570002 483 ntBASIC20.01■□□□□ 0.79
PDE4BQ07343 AC091167.2-201ENST00000579581 588 ntBASIC20.01■□□□□ 0.79
PDE4BQ07343 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE4BQ07343 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE4BQ07343 AC068137.2-201ENST00000605408 478 ntBASIC20.01■□□□□ 0.79
PDE4BQ07343 AC139530.3-201ENST00000620344 690 ntBASIC20.01■□□□□ 0.79
PDE4BQ07343 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE4BQ07343 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms