Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.37□□□□□ -0.11
COL10A1Q03692 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.37□□□□□ -0.11
COL10A1Q03692 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.37□□□□□ -0.11
COL10A1Q03692 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 AF238378.1-201ENST00000526806 358 ntBASIC14.37□□□□□ -0.11
COL10A1Q03692 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.37□□□□□ -0.11
COL10A1Q03692 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.37□□□□□ -0.11
COL10A1Q03692 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 UBALD1-205ENST00000590891 2641 ntBASIC14.37□□□□□ -0.11
COL10A1Q03692 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.37□□□□□ -0.11
COL10A1Q03692 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
COL10A1Q03692 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.36□□□□□ -0.11
COL10A1Q03692 FRMD8P1-201ENST00000440433 1524 ntBASIC14.36□□□□□ -0.11
COL10A1Q03692 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
COL10A1Q03692 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
COL10A1Q03692 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.36□□□□□ -0.11
COL10A1Q03692 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.36□□□□□ -0.11
COL10A1Q03692 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.36□□□□□ -0.11
COL10A1Q03692 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.36□□□□□ -0.11
COL10A1Q03692 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.36□□□□□ -0.11
COL10A1Q03692 UNC93B7-201ENST00000509439 705 ntBASIC14.36□□□□□ -0.11
COL10A1Q03692 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.36□□□□□ -0.11
COL10A1Q03692 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.36□□□□□ -0.11
COL10A1Q03692 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL10A1Q03692 MTDHP4-201ENST00000600287 670 ntBASIC14.36□□□□□ -0.11
COL10A1Q03692 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.36□□□□□ -0.11
COL10A1Q03692 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL10A1Q03692 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 AL353135.1-201ENST00000606729 504 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 AL589182.2-201ENST00000619332 1049 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 AC105020.1-201ENST00000435356 2205 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms