Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 HLA-A-202ENST00000376806 1854 ntBASIC16.38■□□□□ 0.21
HMGCS1Q01581 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCS1Q01581 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCS1Q01581 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AL391256.1-201ENST00000443260 1855 ntBASIC16.37■□□□□ 0.21
HMGCS1Q01581 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGCS1Q01581 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCS1Q01581 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 DOC2GP-204ENST00000639052 2548 ntBASIC16.36■□□□□ 0.21
HMGCS1Q01581 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 KRT18P56-201ENST00000507275 550 ntBASIC16.36■□□□□ 0.21
HMGCS1Q01581 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 AC064862.7-201ENST00000604520 867 ntBASIC16.36■□□□□ 0.21
HMGCS1Q01581 AL353135.1-201ENST00000606729 504 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms