Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
RPL39P62891 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 TSPY20P-201ENST00000450910 630 ntBASIC12.05□□□□□ -0.48
RPL39P62891 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 AC068472.1-201ENST00000474589 881 ntBASIC12.05□□□□□ -0.48
RPL39P62891 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.05□□□□□ -0.48
RPL39P62891 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RPL39P62891 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RPL39P62891 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RPL39P62891 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.04□□□□□ -0.48
RPL39P62891 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.04□□□□□ -0.48
RPL39P62891 RASA4DP-201ENST00000460726 1199 ntBASIC12.04□□□□□ -0.48
RPL39P62891 AL355075.4-201ENST00000554988 638 ntBASIC12.04□□□□□ -0.48
RPL39P62891 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
RPL39P62891 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 AC010947.1-201ENST00000623454 693 ntBASIC12.04□□□□□ -0.48
RPL39P62891 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 AC005052.1-201ENST00000625181 2492 ntBASIC12.04□□□□□ -0.48
RPL39P62891 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 AC126755.1-201ENST00000525846 6405 ntBASIC12.04□□□□□ -0.48
RPL39P62891 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.04□□□□□ -0.48
RPL39P62891 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.04□□□□□ -0.48
RPL39P62891 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RPL39P62891 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RPL39P62891 AC144831.1-201ENST00000573312 2656 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms