Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP54P61011 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP54P61011 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP54P61011 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SRP54P61011 AP002472.1-201ENST00000577490 586 ntBASIC16.74■□□□□ 0.27
SRP54P61011 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP54P61011 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SRP54P61011 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 AC068880.1-201ENST00000507289 2297 ntBASIC16.73■□□□□ 0.27
SRP54P61011 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP54P61011 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 AC093525.9-201ENST00000624961 1746 ntBASIC16.73■□□□□ 0.27
SRP54P61011 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SRP54P61011 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 CNN2P11-201ENST00000429351 262 ntBASIC16.73■□□□□ 0.27
SRP54P61011 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SRP54P61011 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.73■□□□□ 0.27
SRP54P61011 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.73■□□□□ 0.27
SRP54P61011 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP54P61011 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP54P61011 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP54P61011 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP54P61011 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SRP54P61011 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP54P61011 REXO1L3P-201ENST00000622202 1288 ntBASIC16.73■□□□□ 0.27
SRP54P61011 AC092902.6-201ENST00000641783 218 ntBASIC16.73■□□□□ 0.27
SRP54P61011 AL645728.2-201ENST00000641974 660 ntBASIC16.73■□□□□ 0.27
SRP54P61011 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.73■□□□□ 0.27
SRP54P61011 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 AC092919.2-201ENST00000623631 1645 ntBASIC16.73■□□□□ 0.27
SRP54P61011 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SRP54P61011 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP54P61011 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP54P61011 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 NOC2LP2-201ENST00000407594 1944 ntBASIC16.72■□□□□ 0.27
SRP54P61011 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 PMS2P2-201ENST00000425039 1128 ntBASIC16.72■□□□□ 0.27
SRP54P61011 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.72■□□□□ 0.27
SRP54P61011 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SRP54P61011 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SRP54P61011 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRP54P61011 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.72■□□□□ 0.27
SRP54P61011 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.72■□□□□ 0.27
SRP54P61011 OR6D1P-203ENST00000641209 4860 ntBASIC16.71■□□□□ 0.27
SRP54P61011 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms