Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VSX2P58304 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.25■□□□□ 0.19
VSX2P58304 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VSX2P58304 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
VSX2P58304 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 FRMD8P1-201ENST00000440433 1524 ntBASIC16.24■□□□□ 0.19
VSX2P58304 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.24■□□□□ 0.19
VSX2P58304 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 AC092053.1-201ENST00000605787 1936 ntBASIC16.24■□□□□ 0.19
VSX2P58304 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.24■□□□□ 0.19
VSX2P58304 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 CXCL1P1-201ENST00000502804 216 ntBASIC16.24■□□□□ 0.19
VSX2P58304 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.24■□□□□ 0.19
VSX2P58304 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 AC040169.1-201ENST00000565382 521 ntBASIC16.24■□□□□ 0.19
VSX2P58304 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.24■□□□□ 0.19
VSX2P58304 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.24■□□□□ 0.19
VSX2P58304 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VSX2P58304 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 AL645608.8-201ENST00000606034 2086 ntBASIC16.23■□□□□ 0.19
VSX2P58304 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
VSX2P58304 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 AC129492.6-201ENST00000611383 1305 ntBASIC16.23■□□□□ 0.19
VSX2P58304 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
VSX2P58304 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 AC084018.2-201ENST00000613093 2607 ntBASIC16.23■□□□□ 0.19
VSX2P58304 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VSX2P58304 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
VSX2P58304 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VSX2P58304 AC096734.2-201ENST00000562054 433 ntBASIC16.23■□□□□ 0.19
VSX2P58304 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.23■□□□□ 0.19
VSX2P58304 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.23■□□□□ 0.19
VSX2P58304 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.23■□□□□ 0.19
VSX2P58304 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VSX2P58304 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.22■□□□□ 0.19
VSX2P58304 BCAR1-209ENST00000546196 1340 ntBASIC16.22■□□□□ 0.19
VSX2P58304 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VSX2P58304 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.22■□□□□ 0.19
VSX2P58304 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 AC108860.2-201ENST00000562760 2183 ntBASIC16.22■□□□□ 0.19
VSX2P58304 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VSX2P58304 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.22■□□□□ 0.19
VSX2P58304 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.22■□□□□ 0.19
VSX2P58304 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.22■□□□□ 0.19
VSX2P58304 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms