Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.78■□□□□ 0.12
PER3P56645 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
PER3P56645 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 PRYP5-201ENST00000451909 266 ntBASIC15.78■□□□□ 0.12
PER3P56645 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 DUTP2-201ENST00000519164 463 ntBASIC15.78■□□□□ 0.12
PER3P56645 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.78■□□□□ 0.12
PER3P56645 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.78■□□□□ 0.12
PER3P56645 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PER3P56645 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.78■□□□□ 0.12
PER3P56645 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.78■□□□□ 0.12
PER3P56645 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.78■□□□□ 0.12
PER3P56645 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 AC103702.1-201ENST00000548801 2630 ntBASIC15.78■□□□□ 0.12
PER3P56645 UBALD1-205ENST00000590891 2641 ntBASIC15.78■□□□□ 0.12
PER3P56645 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PER3P56645 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PER3P56645 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.78■□□□□ 0.12
PER3P56645 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.77■□□□□ 0.12
PER3P56645 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.77■□□□□ 0.12
PER3P56645 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PER3P56645 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PER3P56645 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PER3P56645 AC096633.1-201ENST00000422446 749 ntBASIC15.77■□□□□ 0.12
PER3P56645 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.77■□□□□ 0.12
PER3P56645 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.77■□□□□ 0.12
PER3P56645 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.77■□□□□ 0.12
PER3P56645 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.77■□□□□ 0.12
PER3P56645 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PER3P56645 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PER3P56645 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.77■□□□□ 0.11
PER3P56645 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
PER3P56645 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PER3P56645 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PER3P56645 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.76■□□□□ 0.11
PER3P56645 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 AC244107.1-201ENST00000442033 332 ntBASIC15.76■□□□□ 0.11
PER3P56645 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.76■□□□□ 0.11
PER3P56645 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 MIR4751-201ENST00000578027 74 ntBASIC15.76■□□□□ 0.11
PER3P56645 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.76■□□□□ 0.11
PER3P56645 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.76■□□□□ 0.11
PER3P56645 AL589182.2-201ENST00000619332 1049 ntBASIC15.76■□□□□ 0.11
PER3P56645 AL513190.1-201ENST00000621254 727 ntBASIC15.76■□□□□ 0.11
PER3P56645 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.76■□□□□ 0.11
PER3P56645 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 FLJ38576-201ENST00000623820 2459 ntBASIC15.76■□□□□ 0.11
PER3P56645 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms