Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.63□□□□□ -0.39
CMC4P56277 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.63□□□□□ -0.39
CMC4P56277 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.63□□□□□ -0.39
CMC4P56277 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 AC023141.13-201ENST00000604991 943 ntBASIC12.63□□□□□ -0.39
CMC4P56277 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CMC4P56277 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CMC4P56277 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.63□□□□□ -0.39
CMC4P56277 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CMC4P56277 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.62□□□□□ -0.39
CMC4P56277 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 AC141586.5-201ENST00000624546 2050 ntBASIC12.62□□□□□ -0.39
CMC4P56277 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 AC002310.6-201ENST00000624451 1377 ntBASIC12.62□□□□□ -0.39
CMC4P56277 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CMC4P56277 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CMC4P56277 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 MED15P5-201ENST00000423150 992 ntBASIC12.62□□□□□ -0.39
CMC4P56277 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.62□□□□□ -0.39
CMC4P56277 KRT18P3-201ENST00000451602 1288 ntBASIC12.62□□□□□ -0.39
CMC4P56277 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.62□□□□□ -0.39
CMC4P56277 AC034105.1-201ENST00000563488 319 ntBASIC12.62□□□□□ -0.39
CMC4P56277 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 MIR600HG-201ENST00000449175 5984 ntBASIC12.62□□□□□ -0.39
CMC4P56277 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.62□□□□□ -0.39
CMC4P56277 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMC4P56277 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.62□□□□□ -0.39
CMC4P56277 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CMC4P56277 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CMC4P56277 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms