Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
PMS1P54277 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 PTCHD3P3-201ENST00000403073 906 ntBASIC18.66■□□□□ 0.58
PMS1P54277 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.66■□□□□ 0.58
PMS1P54277 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.66■□□□□ 0.58
PMS1P54277 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.66■□□□□ 0.58
PMS1P54277 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PMS1P54277 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 AC006504.4-201ENST00000592118 1568 ntBASIC18.66■□□□□ 0.58
PMS1P54277 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PMS1P54277 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PMS1P54277 LINC02199-201ENST00000506655 2702 ntBASIC18.65■□□□□ 0.58
PMS1P54277 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 SNX33P1-201ENST00000592116 1762 ntBASIC18.65■□□□□ 0.58
PMS1P54277 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PMS1P54277 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PMS1P54277 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.65■□□□□ 0.58
PMS1P54277 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.65■□□□□ 0.58
PMS1P54277 ELK2BP-201ENST00000415014 1224 ntBASIC18.65■□□□□ 0.58
PMS1P54277 AP002490.2-201ENST00000524791 560 ntBASIC18.65■□□□□ 0.58
PMS1P54277 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.65■□□□□ 0.58
PMS1P54277 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.65■□□□□ 0.58
PMS1P54277 AC139887.3-201ENST00000568585 713 ntBASIC18.65■□□□□ 0.58
PMS1P54277 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PMS1P54277 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PMS1P54277 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.65■□□□□ 0.58
PMS1P54277 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PMS1P54277 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PMS1P54277 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PMS1P54277 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PMS1P54277 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.64■□□□□ 0.58
PMS1P54277 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PMS1P54277 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.64■□□□□ 0.57
PMS1P54277 AC006277.1-201ENST00000624348 1610 ntBASIC18.64■□□□□ 0.57
PMS1P54277 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMS1P54277 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PMS1P54277 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.64■□□□□ 0.57
PMS1P54277 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PMS1P54277 SAPCD2P3-201ENST00000455031 850 ntBASIC18.64■□□□□ 0.57
PMS1P54277 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
PMS1P54277 IFNL4P1-201ENST00000607083 540 ntBASIC18.64■□□□□ 0.57
PMS1P54277 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.64■□□□□ 0.57
PMS1P54277 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PMS1P54277 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PMS1P54277 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.64■□□□□ 0.57
PMS1P54277 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PMS1P54277 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
PMS1P54277 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMS1P54277 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PMS1P54277 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms