Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KRT18P58-201ENST00000527480 1120 ntBASIC17.14■□□□□ 0.33
LIMK2P53671 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.14■□□□□ 0.33
LIMK2P53671 AC116407.3-201ENST00000623905 1129 ntBASIC17.14■□□□□ 0.33
LIMK2P53671 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 AC018695.7-201ENST00000624587 2492 ntBASIC17.14■□□□□ 0.33
LIMK2P53671 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LIMK2P53671 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 RPL13AP23-201ENST00000480739 586 ntBASIC17.13■□□□□ 0.33
LIMK2P53671 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.13■□□□□ 0.33
LIMK2P53671 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 AL139288.1-201ENST00000623748 933 ntBASIC17.13■□□□□ 0.33
LIMK2P53671 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.13■□□□□ 0.33
LIMK2P53671 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
LIMK2P53671 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.13■□□□□ 0.33
LIMK2P53671 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIMK2P53671 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LIMK2P53671 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LIMK2P53671 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
LIMK2P53671 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.12■□□□□ 0.33
LIMK2P53671 PMPCAP1-201ENST00000508114 1576 ntBASIC17.12■□□□□ 0.33
LIMK2P53671 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LIMK2P53671 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.12■□□□□ 0.33
LIMK2P53671 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.12■□□□□ 0.33
LIMK2P53671 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.12■□□□□ 0.33
LIMK2P53671 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.12■□□□□ 0.33
LIMK2P53671 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.12■□□□□ 0.33
LIMK2P53671 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.12■□□□□ 0.33
LIMK2P53671 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LIMK2P53671 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIMK2P53671 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LIMK2P53671 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LIMK2P53671 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 RPS2P1-201ENST00000434010 821 ntBASIC17.11■□□□□ 0.33
LIMK2P53671 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.11■□□□□ 0.33
LIMK2P53671 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.11■□□□□ 0.33
LIMK2P53671 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 AP000867.4-201ENST00000641616 219 ntBASIC17.11■□□□□ 0.33
LIMK2P53671 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 PCDHB17P-201ENST00000539533 2393 ntBASIC17.11■□□□□ 0.33
LIMK2P53671 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms