Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.11■□□□□ 0.65
USP11P51784 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.11■□□□□ 0.65
USP11P51784 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP11P51784 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.11■□□□□ 0.65
USP11P51784 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
USP11P51784 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.11■□□□□ 0.65
USP11P51784 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 CYP2A7P1-201ENST00000595391 815 ntBASIC19.11■□□□□ 0.65
USP11P51784 AL139011.1-202ENST00000642063 584 ntBASIC19.11■□□□□ 0.65
USP11P51784 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
USP11P51784 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP11P51784 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.11■□□□□ 0.65
USP11P51784 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
USP11P51784 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 AC005915.1-201ENST00000624912 2018 ntBASIC19.1■□□□□ 0.65
USP11P51784 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 AL391256.1-201ENST00000443260 1855 ntBASIC19.1■□□□□ 0.65
USP11P51784 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
USP11P51784 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP11P51784 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.1■□□□□ 0.65
USP11P51784 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.1■□□□□ 0.65
USP11P51784 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.1■□□□□ 0.65
USP11P51784 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.1■□□□□ 0.65
USP11P51784 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.1■□□□□ 0.65
USP11P51784 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.1■□□□□ 0.65
USP11P51784 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
USP11P51784 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP11P51784 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP11P51784 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.1■□□□□ 0.65
USP11P51784 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP11P51784 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP11P51784 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.09■□□□□ 0.65
USP11P51784 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 YBX2P1-201ENST00000394192 760 ntBASIC19.09■□□□□ 0.65
USP11P51784 AC140658.5-201ENST00000438532 169 ntBASIC19.09■□□□□ 0.65
USP11P51784 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.09■□□□□ 0.65
USP11P51784 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.09■□□□□ 0.65
USP11P51784 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
USP11P51784 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.09■□□□□ 0.65
USP11P51784 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.09■□□□□ 0.65
USP11P51784 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP11P51784 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms