Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RFC1P35251 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC1P35251 AC006504.4-201ENST00000592118 1568 ntBASIC17.91■□□□□ 0.46
RFC1P35251 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC1P35251 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
RFC1P35251 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC1P35251 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RFC1P35251 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 PTCHD3P3-201ENST00000403073 906 ntBASIC17.9■□□□□ 0.46
RFC1P35251 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 HNRNPDP1-201ENST00000439535 754 ntBASIC17.9■□□□□ 0.46
RFC1P35251 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RFC1P35251 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC1P35251 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFC1P35251 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RFC1P35251 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC1P35251 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC1P35251 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.89■□□□□ 0.46
RFC1P35251 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFC1P35251 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
RFC1P35251 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC1P35251 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC1P35251 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.89■□□□□ 0.45
RFC1P35251 LAGE3P1-201ENST00000425356 484 ntBASIC17.89■□□□□ 0.45
RFC1P35251 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RFC1P35251 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 AC073648.2-201ENST00000510116 352 ntBASIC17.89■□□□□ 0.45
RFC1P35251 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.89■□□□□ 0.45
RFC1P35251 KRT126P-201ENST00000549467 1181 ntBASIC17.89■□□□□ 0.45
RFC1P35251 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RFC1P35251 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC1P35251 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RFC1P35251 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
RFC1P35251 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RFC1P35251 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC1P35251 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC1P35251 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFC1P35251 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RFC1P35251 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFC1P35251 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RFC1P35251 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFC1P35251 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms