Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC002056.1-201ENST00000395613 760 ntBASIC19.26■□□□□ 0.67
HOXA13P31271 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA13P31271 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA13P31271 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 AC124947.2-201ENST00000547118 1133 ntBASIC19.26■□□□□ 0.67
HOXA13P31271 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA13P31271 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA13P31271 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA13P31271 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.26■□□□□ 0.67
HOXA13P31271 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA13P31271 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA13P31271 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA13P31271 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA13P31271 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXA13P31271 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXA13P31271 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXA13P31271 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXA13P31271 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
HOXA13P31271 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXA13P31271 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 ADH5P3-201ENST00000433842 1137 ntBASIC19.25■□□□□ 0.67
HOXA13P31271 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA13P31271 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HOXA13P31271 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA13P31271 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXA13P31271 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXA13P31271 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA13P31271 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA13P31271 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
HOXA13P31271 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.24■□□□□ 0.67
HOXA13P31271 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA13P31271 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA13P31271 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXA13P31271 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXA13P31271 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA13P31271 HCG4-201ENST00000418983 998 ntBASIC19.24■□□□□ 0.67
HOXA13P31271 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXA13P31271 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA13P31271 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HOXA13P31271 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA13P31271 AC105339.1-204ENST00000636249 355 ntBASIC19.24■□□□□ 0.67
HOXA13P31271 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA13P31271 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HOXA13P31271 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HOXA13P31271 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA13P31271 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA13P31271 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA13P31271 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA13P31271 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA13P31271 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HOXA13P31271 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXA13P31271 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA13P31271 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA13P31271 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA13P31271 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HOXA13P31271 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA13P31271 AC004461.1-201ENST00000412461 403 ntBASIC19.23■□□□□ 0.67
HOXA13P31271 AL355306.1-201ENST00000415580 579 ntBASIC19.23■□□□□ 0.67
HOXA13P31271 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA13P31271 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA13P31271 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.23■□□□□ 0.67
HOXA13P31271 AC087641.1-201ENST00000557561 1021 ntBASIC19.23■□□□□ 0.67
HOXA13P31271 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms