Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXA6P31267 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA6P31267 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HOXA6P31267 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA6P31267 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA6P31267 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HOXA6P31267 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA6P31267 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXA6P31267 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HOXA6P31267 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXA6P31267 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.57■□□□□ 0.24
HOXA6P31267 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HOXA6P31267 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.57■□□□□ 0.24
HOXA6P31267 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.57■□□□□ 0.24
HOXA6P31267 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXA6P31267 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HOXA6P31267 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HOXA6P31267 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXA6P31267 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXA6P31267 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HOXA6P31267 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA6P31267 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXA6P31267 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HOXA6P31267 MIR1909-201ENST00000411312 80 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.56■□□□□ 0.24
HOXA6P31267 GNAQP1-201ENST00000444815 1067 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 DOC2GP-202ENST00000514950 1163 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.56■□□□□ 0.24
HOXA6P31267 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.56■□□□□ 0.24
HOXA6P31267 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.56■□□□□ 0.24
HOXA6P31267 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.56■□□□□ 0.24
HOXA6P31267 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXA6P31267 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 AC120498.9-201ENST00000339021 3867 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXA6P31267 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXA6P31267 AL023806.1-201ENST00000603994 1649 ntBASIC16.56■□□□□ 0.24
HOXA6P31267 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HOXA6P31267 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HOXA6P31267 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA6P31267 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HOXA6P31267 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HOXA6P31267 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HOXA6P31267 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HOXA6P31267 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA6P31267 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 SLC25A1P3-201ENST00000395415 828 ntBASIC16.55■□□□□ 0.24
HOXA6P31267 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXA6P31267 MEP1AP4-201ENST00000423244 1087 ntBASIC16.55■□□□□ 0.24
HOXA6P31267 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXA6P31267 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA6P31267 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXA6P31267 AC114501.2-201ENST00000439631 535 ntBASIC16.55■□□□□ 0.24
HOXA6P31267 RN7SL618P-201ENST00000477850 296 ntBASIC16.55■□□□□ 0.24
HOXA6P31267 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms