Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 AL021920.2-201ENST00000624828 1351 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TM4SF1P30408 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF1P30408 RN7SL752P-201ENST00000463779 287 ntBASIC20.84■□□□□ 0.93
TM4SF1P30408 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF1P30408 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 AC098859.1-201ENST00000502915 1238 ntBASIC20.84■□□□□ 0.93
TM4SF1P30408 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TM4SF1P30408 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF1P30408 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.84■□□□□ 0.93
TM4SF1P30408 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF1P30408 AC106886.1-201ENST00000568660 600 ntBASIC20.84■□□□□ 0.93
TM4SF1P30408 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF1P30408 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF1P30408 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.84■□□□□ 0.93
TM4SF1P30408 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF1P30408 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
TM4SF1P30408 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.84■□□□□ 0.93
TM4SF1P30408 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF1P30408 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF1P30408 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TM4SF1P30408 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF1P30408 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF1P30408 MIR1909-201ENST00000411312 80 ntBASIC20.83■□□□□ 0.93
TM4SF1P30408 AC087499.6-201ENST00000411576 835 ntBASIC20.83■□□□□ 0.93
TM4SF1P30408 AP006294.1-201ENST00000415407 339 ntBASIC20.83■□□□□ 0.93
TM4SF1P30408 AC112492.5-201ENST00000421897 457 ntBASIC20.83■□□□□ 0.93
TM4SF1P30408 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.83■□□□□ 0.93
TM4SF1P30408 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.83■□□□□ 0.93
TM4SF1P30408 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TM4SF1P30408 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.83■□□□□ 0.93
TM4SF1P30408 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.83■□□□□ 0.93
TM4SF1P30408 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.83■□□□□ 0.93
TM4SF1P30408 AC016396.2-201ENST00000562575 1417 ntBASIC20.83■□□□□ 0.93
TM4SF1P30408 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TM4SF1P30408 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF1P30408 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.83■□□□□ 0.92
TM4SF1P30408 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.83■□□□□ 0.92
TM4SF1P30408 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF1P30408 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TM4SF1P30408 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF1P30408 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM4SF1P30408 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.83■□□□□ 0.92
TM4SF1P30408 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TM4SF1P30408 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF1P30408 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF1P30408 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF1P30408 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TM4SF1P30408 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.82■□□□□ 0.92
TM4SF1P30408 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.82■□□□□ 0.92
TM4SF1P30408 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.82■□□□□ 0.92
TM4SF1P30408 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.82■□□□□ 0.92
TM4SF1P30408 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.82■□□□□ 0.92
TM4SF1P30408 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
TM4SF1P30408 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.82■□□□□ 0.92
TM4SF1P30408 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM4SF1P30408 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF1P30408 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF1P30408 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF1P30408 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF1P30408 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms