Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.29■□□□□ 0.68
CNGA1P29973 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.29■□□□□ 0.68
CNGA1P29973 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 IGHV3-62-201ENST00000520057 340 ntBASIC19.29■□□□□ 0.68
CNGA1P29973 RARRES2P8-201ENST00000566335 367 ntBASIC19.29■□□□□ 0.68
CNGA1P29973 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.29■□□□□ 0.68
CNGA1P29973 AP001059.3-201ENST00000619053 235 ntBASIC19.29■□□□□ 0.68
CNGA1P29973 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 UXT-AS1-201ENST00000590504 1525 ntBASIC19.29■□□□□ 0.68
CNGA1P29973 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.29■□□□□ 0.68
CNGA1P29973 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 AC106820.2-201ENST00000563775 3264 ntBASIC19.29■□□□□ 0.68
CNGA1P29973 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.29■□□□□ 0.68
CNGA1P29973 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNGA1P29973 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 AC133963.1-201ENST00000504166 1679 ntBASIC19.28■□□□□ 0.68
CNGA1P29973 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CNGA1P29973 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.28■□□□□ 0.68
CNGA1P29973 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.28■□□□□ 0.68
CNGA1P29973 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.28■□□□□ 0.68
CNGA1P29973 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.28■□□□□ 0.68
CNGA1P29973 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNGA1P29973 AL512356.2-201ENST00000546955 174 ntBASIC19.28■□□□□ 0.68
CNGA1P29973 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.28■□□□□ 0.68
CNGA1P29973 AC012645.4-201ENST00000610691 1061 ntBASIC19.28■□□□□ 0.68
CNGA1P29973 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.28■□□□□ 0.68
CNGA1P29973 AL390754.1-201ENST00000619088 582 ntBASIC19.28■□□□□ 0.68
CNGA1P29973 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CNGA1P29973 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.28■□□□□ 0.68
CNGA1P29973 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 FO538757.1-201ENST00000623083 1397 ntBASIC19.28■□□□□ 0.68
CNGA1P29973 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.28■□□□□ 0.68
CNGA1P29973 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNGA1P29973 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.27■□□□□ 0.68
CNGA1P29973 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CNGA1P29973 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.27■□□□□ 0.68
CNGA1P29973 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.27■□□□□ 0.68
CNGA1P29973 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CNGA1P29973 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CNGA1P29973 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.27■□□□□ 0.68
CNGA1P29973 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 TREML5P-201ENST00000421694 576 ntBASIC19.27■□□□□ 0.68
CNGA1P29973 UGT1A2P-201ENST00000454886 866 ntBASIC19.27■□□□□ 0.68
CNGA1P29973 AL512638.1-201ENST00000457493 794 ntBASIC19.27■□□□□ 0.68
CNGA1P29973 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.27■□□□□ 0.68
CNGA1P29973 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.27■□□□□ 0.68
CNGA1P29973 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.27■□□□□ 0.68
CNGA1P29973 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.27■□□□□ 0.68
CNGA1P29973 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNGA1P29973 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNGA1P29973 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNGA1P29973 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.27■□□□□ 0.67
CNGA1P29973 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CNGA1P29973 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CNGA1P29973 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.27■□□□□ 0.67
CNGA1P29973 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNGA1P29973 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.26■□□□□ 0.67
CNGA1P29973 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.26■□□□□ 0.67
CNGA1P29973 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNGA1P29973 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 GK-202ENST00000378941 458 ntTSL 3 BASIC19.26■□□□□ 0.67
CNGA1P29973 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.26■□□□□ 0.67
CNGA1P29973 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.26■□□□□ 0.67
CNGA1P29973 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.26■□□□□ 0.67
CNGA1P29973 SLC25A39P2-201ENST00000537614 270 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms