Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 MIR4469-201ENST00000583919 79 ntBASIC15.37■□□□□ 0.05
GDF1P27539 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 AC026471.1-201ENST00000564629 3026 ntBASIC15.37■□□□□ 0.05
GDF1P27539 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 LINC02012-201ENST00000608206 1725 ntBASIC15.37■□□□□ 0.05
GDF1P27539 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDF1P27539 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GDF1P27539 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.37■□□□□ 0.05
GDF1P27539 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
GDF1P27539 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.36■□□□□ 0.05
GDF1P27539 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.36■□□□□ 0.05
GDF1P27539 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 MKNK2P1-201ENST00000437526 628 ntBASIC15.36■□□□□ 0.05
GDF1P27539 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.36■□□□□ 0.05
GDF1P27539 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
GDF1P27539 AL031432.2-201ENST00000566714 459 ntBASIC15.36■□□□□ 0.05
GDF1P27539 AL928711.1-201ENST00000570165 459 ntBASIC15.36■□□□□ 0.05
GDF1P27539 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.36■□□□□ 0.05
GDF1P27539 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 AC091812.2-201ENST00000619081 385 ntBASIC15.36■□□□□ 0.05
GDF1P27539 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 AC134684.3-201ENST00000641758 218 ntBASIC15.36■□□□□ 0.05
GDF1P27539 AL645728.2-201ENST00000641974 660 ntBASIC15.36■□□□□ 0.05
GDF1P27539 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.36■□□□□ 0.05
GDF1P27539 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.36■□□□□ 0.05
GDF1P27539 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 TOP3BP1-201ENST00000420768 1380 ntBASIC15.36■□□□□ 0.05
GDF1P27539 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDF1P27539 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.35■□□□□ 0.05
GDF1P27539 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 AL353732.1-201ENST00000569618 1459 ntBASIC15.35■□□□□ 0.05
GDF1P27539 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 AC106820.2-201ENST00000563775 3264 ntBASIC15.35■□□□□ 0.05
GDF1P27539 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.35■□□□□ 0.05
GDF1P27539 CEND1P1-201ENST00000451006 455 ntBASIC15.35■□□□□ 0.05
GDF1P27539 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
GDF1P27539 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
GDF1P27539 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms