Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.09■□□□□ 0.17
NCK1P16333 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.09■□□□□ 0.17
NCK1P16333 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 AL365203.3-201ENST00000609742 2057 ntBASIC16.09■□□□□ 0.17
NCK1P16333 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.09■□□□□ 0.17
NCK1P16333 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 AC122714.2-201ENST00000502787 707 ntBASIC16.09■□□□□ 0.17
NCK1P16333 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.09■□□□□ 0.17
NCK1P16333 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.09■□□□□ 0.17
NCK1P16333 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.09■□□□□ 0.17
NCK1P16333 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.09■□□□□ 0.17
NCK1P16333 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 AC068418.2-201ENST00000577309 3703 ntBASIC16.09■□□□□ 0.17
NCK1P16333 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.09■□□□□ 0.17
NCK1P16333 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCK1P16333 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.08■□□□□ 0.17
NCK1P16333 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCK1P16333 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NCK1P16333 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.08■□□□□ 0.17
NCK1P16333 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NCK1P16333 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCK1P16333 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCK1P16333 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
NCK1P16333 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.08■□□□□ 0.17
NCK1P16333 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.08■□□□□ 0.16
NCK1P16333 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.08■□□□□ 0.16
NCK1P16333 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NCK1P16333 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 YBX1P2-201ENST00000489612 999 ntBASIC16.08■□□□□ 0.16
NCK1P16333 STK19B-204ENST00000512515 211 ntBASIC16.08■□□□□ 0.16
NCK1P16333 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.08■□□□□ 0.16
NCK1P16333 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 AC145285.6-201ENST00000604632 637 ntBASIC16.08■□□□□ 0.16
NCK1P16333 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.08■□□□□ 0.16
NCK1P16333 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.08■□□□□ 0.16
NCK1P16333 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.08■□□□□ 0.16
NCK1P16333 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 AC009336.1-201ENST00000608941 1553 ntBASIC16.08■□□□□ 0.16
NCK1P16333 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCK1P16333 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.08■□□□□ 0.16
NCK1P16333 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.07■□□□□ 0.16
NCK1P16333 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.07■□□□□ 0.16
NCK1P16333 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCK1P16333 AC103564.2-201ENST00000432853 1299 ntBASIC16.07■□□□□ 0.16
NCK1P16333 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.07■□□□□ 0.16
NCK1P16333 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCK1P16333 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.07■□□□□ 0.16
NCK1P16333 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms