Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.08■□□□□ 0.32
SRPRAP08240 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRPRAP08240 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 TFAMP1-201ENST00000412727 736 ntBASIC17.08■□□□□ 0.32
SRPRAP08240 METTL21AP1-201ENST00000438852 635 ntBASIC17.08■□□□□ 0.32
SRPRAP08240 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
SRPRAP08240 AL031055.1-201ENST00000606362 631 ntBASIC17.08■□□□□ 0.32
SRPRAP08240 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SRPRAP08240 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRPRAP08240 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SRPRAP08240 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SRPRAP08240 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 TIMM8BP1-201ENST00000452384 211 ntBASIC17.07■□□□□ 0.32
SRPRAP08240 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 MIR4492-201ENST00000581627 80 ntBASIC17.07■□□□□ 0.32
SRPRAP08240 AC027612.4-201ENST00000605371 583 ntBASIC17.07■□□□□ 0.32
SRPRAP08240 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPRAP08240 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
SRPRAP08240 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SRPRAP08240 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRPRAP08240 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRPRAP08240 AL023806.1-201ENST00000603994 1649 ntBASIC17.07■□□□□ 0.32
SRPRAP08240 AC108860.2-201ENST00000562760 2183 ntBASIC17.06■□□□□ 0.32
SRPRAP08240 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.06■□□□□ 0.32
SRPRAP08240 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.06■□□□□ 0.32
SRPRAP08240 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SRPRAP08240 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.06■□□□□ 0.32
SRPRAP08240 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.06■□□□□ 0.32
SRPRAP08240 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SRPRAP08240 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRPRAP08240 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.06■□□□□ 0.32
SRPRAP08240 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.05■□□□□ 0.32
SRPRAP08240 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SRPRAP08240 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SRPRAP08240 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPRAP08240 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPRAP08240 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms