Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR3DP05423 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 MKNK2P1-201ENST00000437526 628 ntBASIC20.26■□□□□ 0.83
POLR3DP05423 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
POLR3DP05423 YBX1P5-201ENST00000509441 847 ntBASIC20.26■□□□□ 0.83
POLR3DP05423 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR3DP05423 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR3DP05423 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
POLR3DP05423 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR3DP05423 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR3DP05423 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR3DP05423 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
POLR3DP05423 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 FAM58CP-201ENST00000435741 640 ntBASIC20.25■□□□□ 0.83
POLR3DP05423 DNAJB3-202ENST00000449667 1266 ntBASIC20.25■□□□□ 0.83
POLR3DP05423 CEND1P1-201ENST00000451006 455 ntBASIC20.25■□□□□ 0.83
POLR3DP05423 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 AC107918.2-201ENST00000530817 355 ntBASIC20.25■□□□□ 0.83
POLR3DP05423 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR3DP05423 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR3DP05423 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR3DP05423 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR3DP05423 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
POLR3DP05423 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.24■□□□□ 0.83
POLR3DP05423 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
POLR3DP05423 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.24■□□□□ 0.83
POLR3DP05423 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.24■□□□□ 0.83
POLR3DP05423 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
POLR3DP05423 AC068137.2-201ENST00000605408 478 ntBASIC20.24■□□□□ 0.83
POLR3DP05423 AL596442.2-201ENST00000610240 980 ntBASIC20.24■□□□□ 0.83
POLR3DP05423 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR3DP05423 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
POLR3DP05423 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR3DP05423 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
POLR3DP05423 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR3DP05423 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR3DP05423 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 ELL2P1-201ENST00000413990 1906 ntBASIC20.23■□□□□ 0.83
POLR3DP05423 AC009053.2-201ENST00000563701 2365 ntBASIC20.23■□□□□ 0.83
POLR3DP05423 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
POLR3DP05423 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR3DP05423 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms