Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFBP01127 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFBP01127 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDGFBP01127 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 PRYP6-201ENST00000514804 343 ntBASIC16.87■□□□□ 0.29
PDGFBP01127 AC104989.1-201ENST00000519711 778 ntBASIC16.87■□□□□ 0.29
PDGFBP01127 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFBP01127 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFBP01127 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.87■□□□□ 0.29
PDGFBP01127 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDGFBP01127 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDGFBP01127 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 AC131009.4-201ENST00000624048 1740 ntBASIC16.87■□□□□ 0.29
PDGFBP01127 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFBP01127 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFBP01127 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDGFBP01127 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 LINC00895-201ENST00000629028 1637 ntBASIC16.86■□□□□ 0.29
PDGFBP01127 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDGFBP01127 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFBP01127 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDGFBP01127 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.86■□□□□ 0.29
PDGFBP01127 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDGFBP01127 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFBP01127 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFBP01127 AC123567.1-201ENST00000548294 1261 ntBASIC16.86■□□□□ 0.29
PDGFBP01127 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFBP01127 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFBP01127 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFBP01127 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PDGFBP01127 AP001350.2-201ENST00000625104 1094 ntBASIC16.86■□□□□ 0.29
PDGFBP01127 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFBP01127 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFBP01127 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 FAM220BP-201ENST00000377689 816 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.85■□□□□ 0.29
PDGFBP01127 AL589987.1-201ENST00000453380 819 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 AC007389.4-201ENST00000454674 793 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFBP01127 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 AC023310.3-201ENST00000557027 670 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 AC100756.1-201ENST00000562736 682 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 AC138749.3-201ENST00000567691 622 ntBASIC16.85■□□□□ 0.29
PDGFBP01127 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 AC116165.1-201ENST00000611806 668 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms