Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MBD3O95983 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD3O95983 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.51■□□□□ 0.71
MBD3O95983 AL031432.5-201ENST00000641059 760 ntBASIC19.51■□□□□ 0.71
MBD3O95983 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD3O95983 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.51■□□□□ 0.71
MBD3O95983 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 FAM220CP-201ENST00000395253 831 ntBASIC19.5■□□□□ 0.71
MBD3O95983 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.5■□□□□ 0.71
MBD3O95983 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 AC005332.3-201ENST00000589904 676 ntBASIC19.5■□□□□ 0.71
MBD3O95983 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MBD3O95983 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.5■□□□□ 0.71
MBD3O95983 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MBD3O95983 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MBD3O95983 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 AC005052.1-201ENST00000625181 2492 ntBASIC19.49■□□□□ 0.71
MBD3O95983 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MBD3O95983 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.49■□□□□ 0.71
MBD3O95983 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.49■□□□□ 0.71
MBD3O95983 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 DUX4L17-201ENST00000557360 1267 ntBASIC19.49■□□□□ 0.71
MBD3O95983 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 AC073912.3-201ENST00000624414 853 ntBASIC19.49■□□□□ 0.71
MBD3O95983 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 AL596087.1-201ENST00000400979 1969 ntBASIC19.49■□□□□ 0.71
MBD3O95983 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
MBD3O95983 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.49■□□□□ 0.71
MBD3O95983 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
MBD3O95983 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MBD3O95983 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD3O95983 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 AC126177.1-201ENST00000547829 2218 ntBASIC19.48■□□□□ 0.71
MBD3O95983 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD3O95983 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD3O95983 AC003669.1-201ENST00000334569 611 ntBASIC19.48■□□□□ 0.71
MBD3O95983 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms