Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 AF186996.4-201ENST00000467186 377 ntBASIC19.62■□□□□ 0.73
CTDNEP1O95476 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.62■□□□□ 0.73
CTDNEP1O95476 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 AL160237.2-201ENST00000556165 472 ntBASIC19.62■□□□□ 0.73
CTDNEP1O95476 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.62■□□□□ 0.73
CTDNEP1O95476 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.62■□□□□ 0.73
CTDNEP1O95476 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTDNEP1O95476 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 AL512652.2-201ENST00000625156 1716 ntBASIC19.62■□□□□ 0.73
CTDNEP1O95476 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDNEP1O95476 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC004870.1-201ENST00000315132 882 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC117500.6-201ENST00000624871 588 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 AL139011.1-202ENST00000642063 584 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 AC018695.7-201ENST00000624587 2492 ntBASIC19.61■□□□□ 0.73
CTDNEP1O95476 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.61■□□□□ 0.73
CTDNEP1O95476 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTDNEP1O95476 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 FAAHP1-202ENST00000446499 1238 ntBASIC19.6■□□□□ 0.73
CTDNEP1O95476 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.6■□□□□ 0.73
CTDNEP1O95476 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTDNEP1O95476 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDNEP1O95476 HTR7P1-202ENST00000624664 4411 ntBASIC19.59■□□□□ 0.73
CTDNEP1O95476 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDNEP1O95476 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTDNEP1O95476 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.59■□□□□ 0.73
CTDNEP1O95476 AL031284.1-201ENST00000419297 478 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms