Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CPNE3O75131 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CPNE3O75131 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 IGLL3P-201ENST00000412472 434 ntBASIC16.35■□□□□ 0.21
CPNE3O75131 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE3O75131 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE3O75131 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE3O75131 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 AL590787.1-201ENST00000568856 1315 ntBASIC16.35■□□□□ 0.21
CPNE3O75131 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE3O75131 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CPNE3O75131 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CPNE3O75131 AC211486.1-202ENST00000416371 468 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 RPS8P6-201ENST00000426177 609 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE3O75131 AC211476.1-201ENST00000503899 468 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 AC096734.2-201ENST00000562054 433 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 AC005829.1-201ENST00000570002 483 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE3O75131 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE3O75131 AC010507.1-201ENST00000633895 436 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 AC134684.3-201ENST00000641758 218 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 AC092865.6-201ENST00000642101 219 ntBASIC16.34■□□□□ 0.21
CPNE3O75131 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CPNE3O75131 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE3O75131 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE3O75131 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE3O75131 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE3O75131 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CPNE3O75131 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE3O75131 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.33■□□□□ 0.21
CPNE3O75131 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CPNE3O75131 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CPNE3O75131 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CPNE3O75131 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CPNE3O75131 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CPNE3O75131 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.33■□□□□ 0.21
CPNE3O75131 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE3O75131 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE3O75131 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE3O75131 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CPNE3O75131 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 AP001160.2-201ENST00000596071 487 ntBASIC16.33■□□□□ 0.2
CPNE3O75131 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms