Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LDB2O43679 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
LDB2O43679 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
LDB2O43679 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.96■□□□□ 0.31
LDB2O43679 AC107918.2-201ENST00000530817 355 ntBASIC16.96■□□□□ 0.31
LDB2O43679 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.96■□□□□ 0.31
LDB2O43679 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 AC013467.2-201ENST00000605472 835 ntBASIC16.96■□□□□ 0.31
LDB2O43679 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.96■□□□□ 0.31
LDB2O43679 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.96■□□□□ 0.31
LDB2O43679 AC005593.1-201ENST00000624894 515 ntBASIC16.96■□□□□ 0.31
LDB2O43679 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 PCDHA14-201ENST00000506751 2298 ntBASIC16.96■□□□□ 0.31
LDB2O43679 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LDB2O43679 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LDB2O43679 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LDB2O43679 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LDB2O43679 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LDB2O43679 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LDB2O43679 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.95■□□□□ 0.3
LDB2O43679 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.95■□□□□ 0.3
LDB2O43679 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LDB2O43679 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
LDB2O43679 AC092910.1-201ENST00000482027 1129 ntBASIC16.95■□□□□ 0.3
LDB2O43679 AC079776.4-201ENST00000511039 504 ntBASIC16.95■□□□□ 0.3
LDB2O43679 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.95■□□□□ 0.3
LDB2O43679 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.95■□□□□ 0.3
LDB2O43679 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
LDB2O43679 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.95■□□□□ 0.3
LDB2O43679 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 AC116407.3-201ENST00000623905 1129 ntBASIC16.95■□□□□ 0.3
LDB2O43679 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 AC006277.1-201ENST00000624348 1610 ntBASIC16.95■□□□□ 0.3
LDB2O43679 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LDB2O43679 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.95■□□□□ 0.3
LDB2O43679 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDB2O43679 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.95■□□□□ 0.3
LDB2O43679 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.95■□□□□ 0.3
LDB2O43679 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.94■□□□□ 0.3
LDB2O43679 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 AL662844.1-201ENST00000546340 181 ntBASIC16.94■□□□□ 0.3
LDB2O43679 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.94■□□□□ 0.3
LDB2O43679 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.94■□□□□ 0.3
LDB2O43679 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 AP001005.1-201ENST00000571755 1248 ntBASIC16.94■□□□□ 0.3
LDB2O43679 OR7E47P-204ENST00000575924 449 ntBASIC16.94■□□□□ 0.3
LDB2O43679 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms