Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC26.93■■□□□ 1.9
CHD1O14646 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC26.93■■□□□ 1.9
CHD1O14646 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
CHD1O14646 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CHD1O14646 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CHD1O14646 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CHD1O14646 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC26.92■■□□□ 1.9
CHD1O14646 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CHD1O14646 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC26.92■■□□□ 1.9
CHD1O14646 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC26.92■■□□□ 1.9
CHD1O14646 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CHD1O14646 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CHD1O14646 AC074044.1-201ENST00000609673 707 ntBASIC26.92■■□□□ 1.9
CHD1O14646 AL022328.1-201ENST00000610050 478 ntBASIC26.92■■□□□ 1.9
CHD1O14646 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHD1O14646 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 SPDYE17-201ENST00000412399 783 ntBASIC26.91■■□□□ 1.9
CHD1O14646 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC26.91■■□□□ 1.9
CHD1O14646 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC26.91■■□□□ 1.9
CHD1O14646 RPL13AP20-201ENST00000459725 609 ntBASIC26.91■■□□□ 1.9
CHD1O14646 FTH1P14-201ENST00000482930 551 ntBASIC26.91■■□□□ 1.9
CHD1O14646 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 FHL2-212ENST00000607522 759 ntTSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CHD1O14646 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CHD1O14646 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CHD1O14646 PODN-203ENST00000395871 2744 ntTSL 5 BASIC26.91■■□□□ 1.9
CHD1O14646 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC26.9■■□□□ 1.9
CHD1O14646 AC068587.3-201ENST00000526613 355 ntBASIC26.9■■□□□ 1.9
CHD1O14646 SLC25A47P1-201ENST00000531577 414 ntBASIC26.9■■□□□ 1.9
CHD1O14646 FOS-206ENST00000555347 1280 ntTSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 ABBA01031660.1-201ENST00000635219 756 ntBASIC26.9■■□□□ 1.9
CHD1O14646 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC26.9■■□□□ 1.9
CHD1O14646 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 RPL28-203ENST00000428193 573 ntTSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CHD1O14646 RPL28-207ENST00000558815 616 ntTSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC26.9■■□□□ 1.9
CHD1O14646 RARRES2P5-201ENST00000564013 466 ntBASIC26.9■■□□□ 1.9
CHD1O14646 DUX4L45-201ENST00000566406 1057 ntBASIC26.9■■□□□ 1.9
CHD1O14646 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 RN7SL560P-201ENST00000577943 264 ntBASIC26.9■■□□□ 1.9
CHD1O14646 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHD1O14646 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CHD1O14646 SNX1-214ENST00000625244 324 ntTSL 5 BASIC26.9■■□□□ 1.9
CHD1O14646 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC26.9■■□□□ 1.9
CHD1O14646 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHD1O14646 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CHD1O14646 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHD1O14646 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CHD1O14646 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
CHD1O14646 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC26.89■■□□□ 1.9
CHD1O14646 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHD1O14646 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC26.89■■□□□ 1.9
CHD1O14646 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC26.89■■□□□ 1.9
CHD1O14646 FAM86HP-204ENST00000513466 959 ntBASIC26.89■■□□□ 1.9
CHD1O14646 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC26.89■■□□□ 1.9
CHD1O14646 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC26.89■■□□□ 1.9
CHD1O14646 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CHD1O14646 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CHD1O14646 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC26.89■■□□□ 1.89
CHD1O14646 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CHD1O14646 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD1O14646 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CHD1O14646 SLC25A24P2-201ENST00000415059 510 ntBASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms