Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX39AO00148 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX39AO00148 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 HTR5BP-201ENST00000430851 1154 ntBASIC19.07■□□□□ 0.64
DDX39AO00148 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX39AO00148 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX39AO00148 DUX4L17-201ENST00000557360 1267 ntBASIC19.07■□□□□ 0.64
DDX39AO00148 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
DDX39AO00148 AC068137.2-201ENST00000605408 478 ntBASIC19.07■□□□□ 0.64
DDX39AO00148 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX39AO00148 C20orf181-201ENST00000623918 480 ntBASIC19.07■□□□□ 0.64
DDX39AO00148 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX39AO00148 AC134684.3-201ENST00000641758 218 ntBASIC19.07■□□□□ 0.64
DDX39AO00148 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX39AO00148 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX39AO00148 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX39AO00148 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DDX39AO00148 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX39AO00148 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX39AO00148 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX39AO00148 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX39AO00148 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
DDX39AO00148 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DDX39AO00148 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DDX39AO00148 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX39AO00148 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX39AO00148 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX39AO00148 AC091812.2-201ENST00000619081 385 ntBASIC19.06■□□□□ 0.64
DDX39AO00148 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX39AO00148 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX39AO00148 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.06■□□□□ 0.64
DDX39AO00148 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
DDX39AO00148 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX39AO00148 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX39AO00148 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX39AO00148 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DDX39AO00148 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX39AO00148 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX39AO00148 AC211486.1-202ENST00000416371 468 ntBASIC19.05■□□□□ 0.64
DDX39AO00148 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX39AO00148 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX39AO00148 CEND1P1-201ENST00000451006 455 ntBASIC19.05■□□□□ 0.64
DDX39AO00148 AC004967.1-201ENST00000453589 447 ntBASIC19.05■□□□□ 0.64
DDX39AO00148 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 AC211476.1-201ENST00000503899 468 ntBASIC19.05■□□□□ 0.64
DDX39AO00148 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX39AO00148 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX39AO00148 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 OR6D1P-203ENST00000641209 4860 ntBASIC19.05■□□□□ 0.64
DDX39AO00148 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX39AO00148 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX39AO00148 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms