Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 MIPEPP3-201ENST00000412105 444 ntBASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PPP1R14BP5-201ENST00000440334 435 ntBASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 KRT16P5-201ENST00000455284 522 ntBASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AC097658.1-201ENST00000475555 843 ntBASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 LINC00167-201ENST00000530583 1419 ntBASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AL391256.1-201ENST00000443260 1855 ntBASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AP002414.2-201ENST00000591780 3365 ntBASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms