Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 AC232323.1-201ENST00000540724 2099 ntBASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.85□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 AC004911.1-201ENST00000416316 871 ntBASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 AC010980.2-201ENST00000587099 1412 ntBASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 AC099521.3-201ENST00000624251 2938 ntBASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.83□□□□□ -0.03
BOLA2-SMG1P6H3BVE0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 IKBKGP1-201ENST00000612193 1073 ntBASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC073111.5-205ENST00000641717 521 ntBASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms