Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 KRT8P23-201ENST00000560090 1207 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 AC051619.7-201ENST00000568314 623 ntBASIC19.61■□□□□ 0.73
USP17L11C9JVI0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
USP17L11C9JVI0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 TUBB3P1-201ENST00000405796 1332 ntBASIC19.6■□□□□ 0.73
USP17L11C9JVI0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 EGFEM1P-202ENST00000431685 1563 ntBASIC19.6■□□□□ 0.73
USP17L11C9JVI0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.6■□□□□ 0.73
USP17L11C9JVI0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 COX20P2-201ENST00000452636 358 ntBASIC19.59■□□□□ 0.73
USP17L11C9JVI0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AC093214.1-201ENST00000511688 1107 ntBASIC19.59■□□□□ 0.73
USP17L11C9JVI0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 MIR4745-201ENST00000577608 62 ntBASIC19.59■□□□□ 0.73
USP17L11C9JVI0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP17L11C9JVI0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 UXT-AS1-201ENST00000590504 1525 ntBASIC19.58■□□□□ 0.73
USP17L11C9JVI0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP17L11C9JVI0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AC055876.3-201ENST00000431496 288 ntBASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms