Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 AL391256.1-201ENST00000443260 1855 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 NCF1C-201ENST00000438382 1427 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 FGFR3P6-201ENST00000457012 610 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 SART3-203ENST00000546611 1184 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TERC-201ENST00000602385 541 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.68□□□□□ -0.22
SRRM4A7MD48 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SRRM4A7MD48 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRRM4A7MD48 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 AL662844.4-201ENST00000606367 2838 ntBASIC13.67□□□□□ -0.22
SRRM4A7MD48 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 HLA-A-202ENST00000376806 1854 ntBASIC13.67□□□□□ -0.22
SRRM4A7MD48 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 AC018695.7-201ENST00000624587 2492 ntBASIC13.67□□□□□ -0.22
SRRM4A7MD48 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SRRM4A7MD48 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRRM4A7MD48 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.66□□□□□ -0.22
SRRM4A7MD48 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SRRM4A7MD48 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.66□□□□□ -0.22
SRRM4A7MD48 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms