Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 FAM58DP-201ENST00000428076 619 ntBASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 SPCS2P4-201ENST00000436160 681 ntBASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 AC067863.1-201ENST00000494933 530 ntBASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 AC109635.5-201ENST00000533593 962 ntBASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 AC087641.1-201ENST00000557561 1021 ntBASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TBC1D3BA6NDS4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 RBPMS2P1-201ENST00000437762 623 ntBASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 SPCS2P1-201ENST00000561636 679 ntBASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.17■□□□□ 0.34
TBC1D3BA6NDS4 SLC22A20-204ENST00000530038 1673 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 AL021920.2-201ENST00000624828 1351 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 AL138688.1-201ENST00000624851 1594 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 WASH6P-202ENST00000359512 1437 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 CNN2P2-201ENST00000443536 909 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 CNN2P3-201ENST00000450201 906 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 AL136317.3-201ENST00000618497 906 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 GNAS-203ENST00000306120 1878 ntBASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.16■□□□□ 0.34
TBC1D3BA6NDS4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3BA6NDS4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms