Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SBNO1A3KN83 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.74■■□□□ 1.23
SBNO1A3KN83 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 ACA64.2-201ENST00000459014 129 ntBASIC22.73■■□□□ 1.23
SBNO1A3KN83 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 AC106886.1-201ENST00000568660 600 ntBASIC22.73■■□□□ 1.23
SBNO1A3KN83 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 AL133215.2-201ENST00000609242 977 ntBASIC22.73■■□□□ 1.23
SBNO1A3KN83 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBNO1A3KN83 AL391825.1-201ENST00000457671 1364 ntBASIC22.73■■□□□ 1.23
SBNO1A3KN83 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.73■■□□□ 1.23
SBNO1A3KN83 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AC016396.2-201ENST00000562575 1417 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 BTBD7P1-201ENST00000447253 1453 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 RN7SL828P-201ENST00000607615 303 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 AL589739.1-201ENST00000607720 493 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 AC017083.2-201ENST00000608069 979 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 MIR6799-201ENST00000620297 69 ntBASIC22.72■■□□□ 1.23
SBNO1A3KN83 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SBNO1A3KN83 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.72■■□□□ 1.23
SBNO1A3KN83 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AC116353.5-201ENST00000638148 1699 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AL512384.1-201ENST00000406683 331 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 MIR1909-201ENST00000411312 80 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 AP006294.1-201ENST00000415407 339 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 WASH4P-201ENST00000564273 1246 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 AC104794.3-201ENST00000566840 1248 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 KRT8P49-201ENST00000604166 1432 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AL138688.1-201ENST00000624851 1594 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 AC093525.9-201ENST00000624961 1746 ntBASIC22.71■■□□□ 1.23
SBNO1A3KN83 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SBNO1A3KN83 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.71■■□□□ 1.23
SBNO1A3KN83 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SBNO1A3KN83 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms