Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PMS2P2-201ENST00000425039 1128 ntBASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 AP006288.1-201ENST00000446065 395 ntBASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 KRT18P2-201ENST00000447938 1258 ntBASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 VN2R19P-201ENST00000442399 1052 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 AC108073.2-201ENST00000464002 357 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 RPS15P9-201ENST00000494093 319 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 YBX1P5-201ENST00000509441 847 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 STK25P1-201ENST00000585406 838 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 OR6D1P-202ENST00000641007 5290 ntBASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA6Q9Y5G7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 AL805961.1-202ENST00000641562 540 ntBASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 AC106886.4-201ENST00000623557 2502 ntBASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA6Q9Y5G7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms