Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 FAM86GP-201ENST00000448322 971 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 AL135999.2-201ENST00000622438 1686 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 AC092919.2-201ENST00000623631 1645 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 FLJ13224-201ENST00000313737 1514 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC129492.6-201ENST00000611383 1305 ntBASIC17.3■□□□□ 0.36
EBF1Q9UH73 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC092474.2-201ENST00000424288 719 ntBASIC17.3■□□□□ 0.36
EBF1Q9UH73 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 FAM86C2P-203ENST00000528684 1004 ntBASIC17.3■□□□□ 0.36
EBF1Q9UH73 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC005498.2-205ENST00000593218 784 ntBASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC009093.7-201ENST00000623853 1223 ntBASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
EBF1Q9UH73 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EBF1Q9UH73 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 AC108860.2-201ENST00000562760 2183 ntBASIC17.29■□□□□ 0.36
EBF1Q9UH73 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EBF1Q9UH73 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.29■□□□□ 0.36
EBF1Q9UH73 AC067863.1-201ENST00000494933 530 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms