Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC004898.1-201ENST00000451057 766 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC106760.1-201ENST00000508690 800 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AP006547.1-201ENST00000563435 692 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 CYP2A7P1-201ENST00000595391 815 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AP001350.2-201ENST00000625104 1094 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC008687.7-202ENST00000637404 953 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AL137060.1-201ENST00000618151 2648 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 TOP3BP1-201ENST00000420768 1380 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AL591846.1-201ENST00000451736 433 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC098859.1-201ENST00000502915 1238 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 MIR6756-201ENST00000616240 63 ntBASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RIMBP3Q9UFD9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 HLA-DQB2-229ENST00000411527 1059 ntBASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 RN7SL555P-201ENST00000584742 339 ntBASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
RIMBP3Q9UFD9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.41■■□□□ 1.82
RIMBP3Q9UFD9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 KRT8P37-201ENST00000451609 1420 ntBASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 AL049840.4-201ENST00000602422 811 ntBASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RIMBP3Q9UFD9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 FNTAP2-201ENST00000430308 634 ntBASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 Z93015.1-201ENST00000451718 390 ntBASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 AL139327.4-201ENST00000612362 153 ntBASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms