Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 AL645728.2-201ENST00000641974 660 ntBASIC15.59■□□□□ 0.09
LRFN1Q9P244 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.59■□□□□ 0.09
LRFN1Q9P244 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRFN1Q9P244 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRFN1Q9P244 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LRFN1Q9P244 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
LRFN1Q9P244 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
LRFN1Q9P244 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LRFN1Q9P244 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.58■□□□□ 0.09
LRFN1Q9P244 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRFN1Q9P244 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 AP002472.1-201ENST00000577490 586 ntBASIC15.58■□□□□ 0.08
LRFN1Q9P244 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.58■□□□□ 0.08
LRFN1Q9P244 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRFN1Q9P244 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 AC092919.2-201ENST00000623631 1645 ntBASIC15.57■□□□□ 0.08
LRFN1Q9P244 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 AC005412.3-201ENST00000580309 715 ntBASIC15.57■□□□□ 0.08
LRFN1Q9P244 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 REXO1L3P-201ENST00000622202 1288 ntBASIC15.57■□□□□ 0.08
LRFN1Q9P244 AC092902.6-201ENST00000641783 218 ntBASIC15.57■□□□□ 0.08
LRFN1Q9P244 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRFN1Q9P244 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRFN1Q9P244 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms