Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 PMS2P4-201ENST00000412466 1052 ntBASIC19.09■□□□□ 0.65
COL20A1Q9P218 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL20A1Q9P218 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.09■□□□□ 0.65
COL20A1Q9P218 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 AC060834.1-201ENST00000443027 2032 ntBASIC19.08■□□□□ 0.65
COL20A1Q9P218 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL20A1Q9P218 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL20A1Q9P218 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.08■□□□□ 0.65
COL20A1Q9P218 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL20A1Q9P218 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL20A1Q9P218 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.08■□□□□ 0.64
COL20A1Q9P218 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 AP001350.2-201ENST00000625104 1094 ntBASIC19.08■□□□□ 0.64
COL20A1Q9P218 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 SNX33P1-201ENST00000592116 1762 ntBASIC19.08■□□□□ 0.64
COL20A1Q9P218 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL20A1Q9P218 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.08■□□□□ 0.64
COL20A1Q9P218 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 AL138918.1-201ENST00000568306 659 ntBASIC19.07■□□□□ 0.64
COL20A1Q9P218 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 AC106820.2-201ENST00000563775 3264 ntBASIC19.07■□□□□ 0.64
COL20A1Q9P218 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL20A1Q9P218 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.07■□□□□ 0.64
COL20A1Q9P218 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 KRT18P32-201ENST00000424695 1287 ntBASIC19.06■□□□□ 0.64
COL20A1Q9P218 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms