Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.22■□□□□ 0.35
HACD3Q9P035 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 RPS2P1-201ENST00000434010 821 ntBASIC17.22■□□□□ 0.35
HACD3Q9P035 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.22■□□□□ 0.35
HACD3Q9P035 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.22■□□□□ 0.35
HACD3Q9P035 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.22■□□□□ 0.35
HACD3Q9P035 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HACD3Q9P035 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.21■□□□□ 0.35
HACD3Q9P035 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.21■□□□□ 0.35
HACD3Q9P035 AP002469.2-201ENST00000531724 424 ntBASIC17.21■□□□□ 0.35
HACD3Q9P035 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
HACD3Q9P035 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 AC104692.2-201ENST00000603054 253 ntBASIC17.21■□□□□ 0.35
HACD3Q9P035 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.21■□□□□ 0.35
HACD3Q9P035 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 AC008735.5-201ENST00000623544 497 ntBASIC17.21■□□□□ 0.35
HACD3Q9P035 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.21■□□□□ 0.35
HACD3Q9P035 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.21■□□□□ 0.35
HACD3Q9P035 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HACD3Q9P035 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HACD3Q9P035 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HACD3Q9P035 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
HACD3Q9P035 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
HACD3Q9P035 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.2■□□□□ 0.34
HACD3Q9P035 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HACD3Q9P035 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.2■□□□□ 0.34
HACD3Q9P035 AP002414.1-201ENST00000391405 1147 ntBASIC17.2■□□□□ 0.34
HACD3Q9P035 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.2■□□□□ 0.34
HACD3Q9P035 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.2■□□□□ 0.34
HACD3Q9P035 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.2■□□□□ 0.34
HACD3Q9P035 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.2■□□□□ 0.34
HACD3Q9P035 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.2■□□□□ 0.34
HACD3Q9P035 AL773604.1-201ENST00000617417 272 ntBASIC17.2■□□□□ 0.34
HACD3Q9P035 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HACD3Q9P035 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HACD3Q9P035 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HACD3Q9P035 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms