Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.94■□□□□ 0.46
TLR9Q9NR96 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 MIR3909-201ENST00000579518 119 ntBASIC17.94■□□□□ 0.46
TLR9Q9NR96 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR9Q9NR96 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR9Q9NR96 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 MIR346-201ENST00000362234 95 ntBASIC17.93■□□□□ 0.46
TLR9Q9NR96 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 AC092580.3-201ENST00000430932 139 ntBASIC17.93■□□□□ 0.46
TLR9Q9NR96 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.93■□□□□ 0.46
TLR9Q9NR96 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR9Q9NR96 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TLR9Q9NR96 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 HCG11-201ENST00000411553 5696 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 AC241585.1-201ENST00000433527 519 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 CRB3P1-201ENST00000449338 276 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 AC091167.2-201ENST00000579581 588 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 MIR4453-201ENST00000584019 89 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms