Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.11■□□□□ 0.33
PDFQ9HBH1 AL139011.1-202ENST00000642063 584 ntBASIC17.11■□□□□ 0.33
PDFQ9HBH1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
PDFQ9HBH1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 AL603756.1-201ENST00000606511 2163 ntBASIC17.11■□□□□ 0.33
PDFQ9HBH1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDFQ9HBH1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AC004832.2-201ENST00000426397 482 ntBASIC17.1■□□□□ 0.33
PDFQ9HBH1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.1■□□□□ 0.33
PDFQ9HBH1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AC002347.1-201ENST00000569543 541 ntBASIC17.1■□□□□ 0.33
PDFQ9HBH1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
PDFQ9HBH1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDFQ9HBH1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
PDFQ9HBH1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 PCDHA12-202ENST00000613593 2588 ntBASIC17.09■□□□□ 0.33
PDFQ9HBH1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AC074386.1-202ENST00000463561 864 ntBASIC17.09■□□□□ 0.33
PDFQ9HBH1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AP001350.2-201ENST00000625104 1094 ntBASIC17.09■□□□□ 0.33
PDFQ9HBH1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AC092919.2-201ENST00000623631 1645 ntBASIC17.09■□□□□ 0.33
PDFQ9HBH1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.09■□□□□ 0.33
PDFQ9HBH1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PDFQ9HBH1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDFQ9HBH1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDFQ9HBH1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms