Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 PRYP5-201ENST00000451909 266 ntBASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AC109462.3-201ENST00000573934 613 ntBASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 STK25P1-201ENST00000585406 838 ntBASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AL355877.3-201ENST00000622820 899 ntBASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLK4Q9HAZ1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 AC026691.1-201ENST00000602502 2017 ntBASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 SCARNA2-201ENST00000458748 420 ntBASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 AL139288.1-201ENST00000623748 933 ntBASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 KRT8P10-201ENST00000450021 1447 ntBASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK4Q9HAZ1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 LINC00304-203ENST00000565008 1864 ntBASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 REXO1L11P-201ENST00000620964 1927 ntBASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 UNC93B7-201ENST00000509439 705 ntBASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 AC073592.5-201ENST00000624854 528 ntBASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLK4Q9HAZ1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms