Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 AL603756.1-201ENST00000606511 2163 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 LAGE3P1-201ENST00000425356 484 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 HLA-J-202ENST00000469281 1241 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 AL139011.1-202ENST00000642063 584 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 CROCCP1-201ENST00000426910 5675 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 HLA-A-202ENST00000376806 1854 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRF2Q9HAW0 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
BRF2Q9HAW0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AC006557.2-201ENST00000592985 1240 ntBASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AC025062.2-201ENST00000605477 670 ntBASIC16.25■□□□□ 0.19
BRF2Q9HAW0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.25■□□□□ 0.19
BRF2Q9HAW0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 AC006277.1-201ENST00000624348 1610 ntBASIC16.24■□□□□ 0.19
BRF2Q9HAW0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 AF238378.1-201ENST00000526806 358 ntBASIC16.24■□□□□ 0.19
BRF2Q9HAW0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 AC021087.4-201ENST00000563761 564 ntBASIC16.24■□□□□ 0.19
BRF2Q9HAW0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 CLEC4GP1-201ENST00000596555 870 ntBASIC16.24■□□□□ 0.19
BRF2Q9HAW0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 AL805961.1-202ENST00000641562 540 ntBASIC16.24■□□□□ 0.19
BRF2Q9HAW0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BRF2Q9HAW0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms