Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 FLJ38576-201ENST00000623820 2459 ntBASIC15.78■□□□□ 0.12
UBQLN3Q9H347 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AC106730.1-201ENST00000566722 1090 ntBASIC15.78■□□□□ 0.12
UBQLN3Q9H347 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AL671883.3-201ENST00000603274 991 ntBASIC15.78■□□□□ 0.12
UBQLN3Q9H347 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 AF228730.7-201ENST00000641842 219 ntBASIC15.78■□□□□ 0.12
UBQLN3Q9H347 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
UBQLN3Q9H347 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 AC092053.1-201ENST00000605787 1936 ntBASIC15.77■□□□□ 0.12
UBQLN3Q9H347 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 RPL13AP23-201ENST00000480739 586 ntBASIC15.77■□□□□ 0.12
UBQLN3Q9H347 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 AL356488.2-201ENST00000602755 427 ntBASIC15.77■□□□□ 0.12
UBQLN3Q9H347 AL139424.1-201ENST00000607572 797 ntBASIC15.77■□□□□ 0.12
UBQLN3Q9H347 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 AC117500.6-201ENST00000624871 588 ntBASIC15.77■□□□□ 0.12
UBQLN3Q9H347 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBQLN3Q9H347 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBQLN3Q9H347 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms