Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 MIR574-201ENST00000385209 96 ntBASIC11.89□□□□□ -0.51
UPK3BQ9BT76 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.89□□□□□ -0.51
UPK3BQ9BT76 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UPK3BQ9BT76 AP002414.3-201ENST00000589352 1468 ntBASIC11.89□□□□□ -0.51
UPK3BQ9BT76 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC046185.3-201ENST00000623228 1824 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC104109.2-201ENST00000602919 1418 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 RNA5SP415-201ENST00000517246 115 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AL353135.1-201ENST00000606729 504 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC027601.4-201ENST00000611259 610 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 FAM197Y3-203ENST00000618346 717 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AL805961.1-202ENST00000641562 540 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 LINC00304-203ENST00000565008 1864 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 AC097637.2-201ENST00000624096 1997 ntBASIC11.88□□□□□ -0.51
UPK3BQ9BT76 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK3BQ9BT76 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms